Cluster: Rep_2197_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2197
- CGC Family ID: CGCFAM_00168
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2197_c_18 | Rep_2197_c_18_223 | 247565 | 251203 | + | GH25 |
| pfam | Rep_2197_c_18 | Rep_2197_c_18_224 | 251274 | 252359 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| pfam | Rep_2197_c_18 | Rep_2197_c_18_225 | 252517 | 253386 | + | NTP_transferase | NTP_transf_3 |
| CAZyme | Rep_2197_c_18 | Rep_2197_c_18_226 | 253376 | 254626 | + | GH25 |
| pfam | Rep_2197_c_18 | Rep_2197_c_18_227 | 254652 | 255215 | + | dTDP_sugar_isom |
| TC | Rep_2197_c_18 | Rep_2197_c_18_228 | 255248 | 256240 | + | 3.A.1.104.1 |
| TC | Rep_2197_c_18 | Rep_2197_c_18_229 | 256340 | 257629 | + | 3.A.1.103.6 |
Gene ID: Rep_2197_c_18_223
Type: CAZyme
Location: 247565 - 251203 (+)
Type: CAZyme
Location: 247565 - 251203 (+)
Gene ID: Rep_2197_c_18_224
Type: pfam
Location: 251274 - 252359 (+)
Type: pfam
Location: 251274 - 252359 (+)
Gene ID: Rep_2197_c_18_225
Type: pfam
Location: 252517 - 253386 (+)
Type: pfam
Location: 252517 - 253386 (+)
Gene ID: Rep_2197_c_18_226
Type: CAZyme
Location: 253376 - 254626 (+)
Type: CAZyme
Location: 253376 - 254626 (+)
Gene ID: Rep_2197_c_18_227
Type: pfam
Location: 254652 - 255215 (+)
Type: pfam
Location: 254652 - 255215 (+)
Gene ID: Rep_2197_c_18_228
Type: TC
Location: 255248 - 256240 (+)
Type: TC
Location: 255248 - 256240 (+)
Gene ID: Rep_2197_c_18_229
Type: TC
Location: 256340 - 257629 (+)
Type: TC
Location: 256340 - 257629 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.