Cluster: Rep_2197_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2197
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2197_c_5 | Rep_2197_c_5_1 | 195 | 1691 | + | 9.B.34.1.1 |
| CAZyme | Rep_2197_c_5 | Rep_2197_c_5_2 | 1716 | 3065 | - | GH43_35 |
| TC | Rep_2197_c_5 | Rep_2197_c_5_3 | 3255 | 4121 | + | 3.A.1.149.1 |
| NULL(UNKNOWN) | Rep_2197_c_5 | Rep_2197_c_5_4 | 4118 | 4822 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_2197_c_5 | Rep_2197_c_5_5 | 4883 | 5248 | + | GntR |
| TC | Rep_2197_c_5 | Rep_2197_c_5_6 | 5245 | 5922 | + | 3.A.1.147.2 |
Gene ID: Rep_2197_c_5_1
Type: TC
Location: 195 - 1691 (+)
Type: TC
Location: 195 - 1691 (+)
Gene ID: Rep_2197_c_5_2
Type: CAZyme
Location: 1716 - 3065 (-)
Type: CAZyme
Location: 1716 - 3065 (-)
Gene ID: Rep_2197_c_5_3
Type: TC
Location: 3255 - 4121 (+)
Type: TC
Location: 3255 - 4121 (+)
Gene ID: Rep_2197_c_5_4
Type:
Location: 4118 - 4822 (+)
Type:
Location: 4118 - 4822 (+)
Gene ID: Rep_2197_c_5_5
Type: TF
Location: 4883 - 5248 (+)
Type: TF
Location: 4883 - 5248 (+)
Gene ID: Rep_2197_c_5_6
Type: TC
Location: 5245 - 5922 (+)
Type: TC
Location: 5245 - 5922 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.