Cluster: Rep_2195_CGC8
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_1 | Rep_2195_c_1_170 | 157893 | 158921 | - | CE19 |
| CAZyme | Rep_2195_c_1 | Rep_2195_c_1_171 | 159049 | 160008 | - | CE8 |
| CAZyme | Rep_2195_c_1 | Rep_2195_c_1_172 | 160026 | 161159 | - | GH105 |
| CAZyme | Rep_2195_c_1 | Rep_2195_c_1_173 | 161345 | 163264 | + | CBM91 | GH43_12 |
| CAZyme | Rep_2195_c_1 | Rep_2195_c_1_174 | 163336 | 164889 | - | GH28 |
| TF | Rep_2195_c_1 | Rep_2195_c_1_175 | 165235 | 166065 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2195_c_1 | Rep_2195_c_1_176 | 166239 | 167630 | + | 2.A.66.1.26 |
| CAZyme | Rep_2195_c_1 | Rep_2195_c_1_177 | 167631 | 169619 | - | GH133 |
Gene ID: Rep_2195_c_1_170
Type: CAZyme
Location: 157893 - 158921 (-)
Type: CAZyme
Location: 157893 - 158921 (-)
Gene ID: Rep_2195_c_1_171
Type: CAZyme
Location: 159049 - 160008 (-)
Type: CAZyme
Location: 159049 - 160008 (-)
Gene ID: Rep_2195_c_1_172
Type: CAZyme
Location: 160026 - 161159 (-)
Type: CAZyme
Location: 160026 - 161159 (-)
Gene ID: Rep_2195_c_1_173
Type: CAZyme
Location: 161345 - 163264 (+)
Type: CAZyme
Location: 161345 - 163264 (+)
Gene ID: Rep_2195_c_1_174
Type: CAZyme
Location: 163336 - 164889 (-)
Type: CAZyme
Location: 163336 - 164889 (-)
Gene ID: Rep_2195_c_1_175
Type: TF
Location: 165235 - 166065 (-)
Type: TF
Location: 165235 - 166065 (-)
Gene ID: Rep_2195_c_1_176
Type: TC
Location: 166239 - 167630 (+)
Type: TC
Location: 166239 - 167630 (+)
Gene ID: Rep_2195_c_1_177
Type: CAZyme
Location: 167631 - 169619 (-)
Type: CAZyme
Location: 167631 - 169619 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.