dbCAN Logo

Cluster: Rep_2195_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2195_c_0 Rep_2195_c_0_224 246724 248328 + CBM91 | GH43_12
NULL(UNKNOWN) Rep_2195_c_0 Rep_2195_c_0_225 248405 248734 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_2195_c_0 Rep_2195_c_0_226 248709 248888 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2195_c_0 Rep_2195_c_0_227 249021 251774 - GH2
TC Rep_2195_c_0 Rep_2195_c_0_228 251805 252947 - 8.A.59.4.1
TC Rep_2195_c_0 Rep_2195_c_0_229 253022 254380 - 2.A.40.7.2
CAZyme Rep_2195_c_0 Rep_2195_c_0_230 254431 255717 - GH3
STP Rep_2195_c_0 Rep_2195_c_0_231 255936 257174 - Aminotran_1_2
CAZyme Rep_2195_c_0 Rep_2195_c_0_232 257322 258347 - GT2
Gene ID: Rep_2195_c_0_224
Type: CAZyme
Location: 246724 - 248328 (+)
Gene ID: Rep_2195_c_0_225
Type:
Location: 248405 - 248734 (-)
Gene ID: Rep_2195_c_0_226
Type:
Location: 248709 - 248888 (-)
Gene ID: Rep_2195_c_0_227
Type: CAZyme
Location: 249021 - 251774 (-)
Gene ID: Rep_2195_c_0_228
Type: TC
Location: 251805 - 252947 (-)
Gene ID: Rep_2195_c_0_229
Type: TC
Location: 253022 - 254380 (-)
Gene ID: Rep_2195_c_0_230
Type: CAZyme
Location: 254431 - 255717 (-)
Gene ID: Rep_2195_c_0_231
Type: STP
Location: 255936 - 257174 (-)
Gene ID: Rep_2195_c_0_232
Type: CAZyme
Location: 257322 - 258347 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
COE1
→
Species
COE1 sp900753305

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List