Cluster: Rep_2195_CGC59
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- CGC Family ID: CGCFAM_11211
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_39 | Rep_2195_c_39_11 | 9729 | 17651 | + | CE12 | PL11_1 |
| NULL(UNKNOWN) | Rep_2195_c_39 | Rep_2195_c_39_12 | 17771 | 18499 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2195_c_39 | Rep_2195_c_39_13 | 18539 | 18844 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2195_c_39 | Rep_2195_c_39_14 | 18929 | 19930 | - | 8.A.5.1.6 |
| TC | Rep_2195_c_39 | Rep_2195_c_39_15 | 20197 | 21633 | + | 1.B.52.2.1 |
Gene ID: Rep_2195_c_39_11
Type: CAZyme
Location: 9729 - 17651 (+)
Type: CAZyme
Location: 9729 - 17651 (+)
Gene ID: Rep_2195_c_39_12
Type:
Location: 17771 - 18499 (+)
Type:
Location: 17771 - 18499 (+)
Gene ID: Rep_2195_c_39_13
Type:
Location: 18539 - 18844 (+)
Type:
Location: 18539 - 18844 (+)
Gene ID: Rep_2195_c_39_14
Type: TC
Location: 18929 - 19930 (-)
Type: TC
Location: 18929 - 19930 (-)
Gene ID: Rep_2195_c_39_15
Type: TC
Location: 20197 - 21633 (+)
Type: TC
Location: 20197 - 21633 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.