Cluster: Rep_2195_CGC51
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2195
- CGC Family ID: CGCFAM_05959
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_25 | Rep_2195_c_25_1 | 273 | 2087 | + | GH35 |
| CAZyme | Rep_2195_c_25 | Rep_2195_c_25_2 | 2161 | 4605 | - | GH2 |
| TC | Rep_2195_c_25 | Rep_2195_c_25_3 | 4798 | 6246 | + | 8.A.59.4.2 |
Gene ID: Rep_2195_c_25_1
Type: CAZyme
Location: 273 - 2087 (+)
Type: CAZyme
Location: 273 - 2087 (+)
Gene ID: Rep_2195_c_25_2
Type: CAZyme
Location: 2161 - 4605 (-)
Type: CAZyme
Location: 2161 - 4605 (-)
Gene ID: Rep_2195_c_25_3
Type: TC
Location: 4798 - 6246 (+)
Type: TC
Location: 4798 - 6246 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.