Cluster: Rep_2195_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_0 | Rep_2195_c_0_149 | 161960 | 163450 | - | GH77 |
| TC | Rep_2195_c_0 | Rep_2195_c_0_150 | 163490 | 164332 | - | 3.A.1.1.45 |
| TC | Rep_2195_c_0 | Rep_2195_c_0_151 | 164332 | 165174 | - | 3.A.1.1.45 |
| TC | Rep_2195_c_0 | Rep_2195_c_0_152 | 165314 | 166720 | - | 3.A.1.1.45 |
Gene ID: Rep_2195_c_0_149
Type: CAZyme
Location: 161960 - 163450 (-)
Type: CAZyme
Location: 161960 - 163450 (-)
Gene ID: Rep_2195_c_0_150
Type: TC
Location: 163490 - 164332 (-)
Type: TC
Location: 163490 - 164332 (-)
Gene ID: Rep_2195_c_0_151
Type: TC
Location: 164332 - 165174 (-)
Type: TC
Location: 164332 - 165174 (-)
Gene ID: Rep_2195_c_0_152
Type: TC
Location: 165314 - 166720 (-)
Type: TC
Location: 165314 - 166720 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2195_c_0_151 | vegan > omnivore | 1.08859 | 0.04329 |
| Rep_2195_c_0_151 | vegetarian > omnivore | 1.97228 | 0.01685 |