Cluster: Rep_2195_CGC49
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- CGC Family ID: CGCFAM_00149
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_22 | Rep_2195_c_22_21 | 21342 | 22409 | + | GT28 |
| pfam | Rep_2195_c_22 | Rep_2195_c_22_22 | 22461 | 22871 | - | HIT | DcpS_C |
| pfam | Rep_2195_c_22 | Rep_2195_c_22_23 | 22888 | 23886 | - | SCP2 |
| TC | Rep_2195_c_22 | Rep_2195_c_22_24 | 23924 | 24514 | - | 9.B.104.1.3 |
| STP | Rep_2195_c_22 | Rep_2195_c_22_25 | 24636 | 25010 | - | Fer4 |
| TC | Rep_2195_c_22 | Rep_2195_c_22_26 | 25016 | 25609 | - | 2.A.115.2.14 |
Gene ID: Rep_2195_c_22_21
Type: CAZyme
Location: 21342 - 22409 (+)
Type: CAZyme
Location: 21342 - 22409 (+)
Gene ID: Rep_2195_c_22_22
Type: pfam
Location: 22461 - 22871 (-)
Type: pfam
Location: 22461 - 22871 (-)
Gene ID: Rep_2195_c_22_23
Type: pfam
Location: 22888 - 23886 (-)
Type: pfam
Location: 22888 - 23886 (-)
Gene ID: Rep_2195_c_22_24
Type: TC
Location: 23924 - 24514 (-)
Type: TC
Location: 23924 - 24514 (-)
Gene ID: Rep_2195_c_22_25
Type: STP
Location: 24636 - 25010 (-)
Type: STP
Location: 24636 - 25010 (-)
Gene ID: Rep_2195_c_22_26
Type: TC
Location: 25016 - 25609 (-)
Type: TC
Location: 25016 - 25609 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.