Cluster: Rep_2195_CGC47
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- CGC Family ID: CGCFAM_01395
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2195_c_21 | Rep_2195_c_21_2 | 628 | 2406 | + | 1.B.52.2.1 |
| NULL(UNKNOWN) | Rep_2195_c_21 | Rep_2195_c_21_3 | 2444 | 2551 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_2195_c_21 | Rep_2195_c_21_4 | 2573 | 3487 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_2195_c_21 | Rep_2195_c_21_5 | 3589 | 5250 | + | GH13_31 |
Gene ID: Rep_2195_c_21_2
Type: TC
Location: 628 - 2406 (+)
Type: TC
Location: 628 - 2406 (+)
Gene ID: Rep_2195_c_21_3
Type:
Location: 2444 - 2551 (+)
Type:
Location: 2444 - 2551 (+)
Gene ID: Rep_2195_c_21_4
Type: TF
Location: 2573 - 3487 (+)
Type: TF
Location: 2573 - 3487 (+)
Gene ID: Rep_2195_c_21_5
Type: CAZyme
Location: 3589 - 5250 (+)
Type: CAZyme
Location: 3589 - 5250 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.