Cluster: Rep_2195_CGC43
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- CGC Family ID: CGCFAM_01410
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2195_c_18 | Rep_2195_c_18_21 | 24361 | 25677 | + | 3.D.6.1.2 |
| TC | Rep_2195_c_18 | Rep_2195_c_18_22 | 25691 | 26623 | + | 3.D.6.1.2 |
| pfam | Rep_2195_c_18 | Rep_2195_c_18_23 | 26620 | 27222 | + | FMN_bind |
| TC | Rep_2195_c_18 | Rep_2195_c_18_24 | 27219 | 28028 | + | 3.D.6.1.2 |
| TC | Rep_2195_c_18 | Rep_2195_c_18_25 | 28021 | 28608 | + | 3.D.6.1.2 |
| TC | Rep_2195_c_18 | Rep_2195_c_18_26 | 28621 | 29412 | + | 3.D.6.1.2 |
| TC | Rep_2195_c_18 | Rep_2195_c_18_27 | 29573 | 30910 | + | 2.A.22.5.3 |
| CAZyme | Rep_2195_c_18 | Rep_2195_c_18_28 | 31030 | 32256 | + | GH25 |
Gene ID: Rep_2195_c_18_21
Type: TC
Location: 24361 - 25677 (+)
Type: TC
Location: 24361 - 25677 (+)
Gene ID: Rep_2195_c_18_22
Type: TC
Location: 25691 - 26623 (+)
Type: TC
Location: 25691 - 26623 (+)
Gene ID: Rep_2195_c_18_23
Type: pfam
Location: 26620 - 27222 (+)
Type: pfam
Location: 26620 - 27222 (+)
Gene ID: Rep_2195_c_18_24
Type: TC
Location: 27219 - 28028 (+)
Type: TC
Location: 27219 - 28028 (+)
Gene ID: Rep_2195_c_18_25
Type: TC
Location: 28021 - 28608 (+)
Type: TC
Location: 28021 - 28608 (+)
Gene ID: Rep_2195_c_18_26
Type: TC
Location: 28621 - 29412 (+)
Type: TC
Location: 28621 - 29412 (+)
Gene ID: Rep_2195_c_18_27
Type: TC
Location: 29573 - 30910 (+)
Type: TC
Location: 29573 - 30910 (+)
Gene ID: Rep_2195_c_18_28
Type: CAZyme
Location: 31030 - 32256 (+)
Type: CAZyme
Location: 31030 - 32256 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.