Cluster: Rep_2195_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_0 | Rep_2195_c_0_138 | 151356 | 152201 | - | GT32 |
| CAZyme | Rep_2195_c_0 | Rep_2195_c_0_139 | 152214 | 153158 | - | GT32 |
| CAZyme | Rep_2195_c_0 | Rep_2195_c_0_140 | 153168 | 154175 | - | GT2 |
| pfam | Rep_2195_c_0 | Rep_2195_c_0_141 | 154179 | 155549 | - | Wzy_C |
| CAZyme | Rep_2195_c_0 | Rep_2195_c_0_142 | 155563 | 156492 | - | GT2 |
| CAZyme | Rep_2195_c_0 | Rep_2195_c_0_143 | 156496 | 157470 | - | GT2 |
| TC | Rep_2195_c_0 | Rep_2195_c_0_144 | 157476 | 158867 | - | 8.A.3.3.2 |
Gene ID: Rep_2195_c_0_138
Type: CAZyme
Location: 151356 - 152201 (-)
Type: CAZyme
Location: 151356 - 152201 (-)
Gene ID: Rep_2195_c_0_139
Type: CAZyme
Location: 152214 - 153158 (-)
Type: CAZyme
Location: 152214 - 153158 (-)
Gene ID: Rep_2195_c_0_140
Type: CAZyme
Location: 153168 - 154175 (-)
Type: CAZyme
Location: 153168 - 154175 (-)
Gene ID: Rep_2195_c_0_141
Type: pfam
Location: 154179 - 155549 (-)
Type: pfam
Location: 154179 - 155549 (-)
Gene ID: Rep_2195_c_0_142
Type: CAZyme
Location: 155563 - 156492 (-)
Type: CAZyme
Location: 155563 - 156492 (-)
Gene ID: Rep_2195_c_0_143
Type: CAZyme
Location: 156496 - 157470 (-)
Type: CAZyme
Location: 156496 - 157470 (-)
Gene ID: Rep_2195_c_0_144
Type: TC
Location: 157476 - 158867 (-)
Type: TC
Location: 157476 - 158867 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.