Cluster: Rep_2195_CGC37
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2195_c_11 | Rep_2195_c_11_25 | 25786 | 27438 | + | 3.A.1.121.4 |
| pfam | Rep_2195_c_11 | Rep_2195_c_11_26 | 27560 | 28408 | + | PHP |
| CAZyme | Rep_2195_c_11 | Rep_2195_c_11_27 | 28570 | 30654 | - | GH31_4 |
| CAZyme | Rep_2195_c_11 | Rep_2195_c_11_28 | 30719 | 33064 | - | GH74 | GH74 | GH74 | GH74 |
| NULL(UNKNOWN) | Rep_2195_c_11 | Rep_2195_c_11_29 | 33192 | 33641 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2195_c_11 | Rep_2195_c_11_30 | 33761 | 34330 | - | GH105 |
Gene ID: Rep_2195_c_11_25
Type: TC
Location: 25786 - 27438 (+)
Type: TC
Location: 25786 - 27438 (+)
Gene ID: Rep_2195_c_11_26
Type: pfam
Location: 27560 - 28408 (+)
Type: pfam
Location: 27560 - 28408 (+)
Gene ID: Rep_2195_c_11_27
Type: CAZyme
Location: 28570 - 30654 (-)
Type: CAZyme
Location: 28570 - 30654 (-)
Gene ID: Rep_2195_c_11_28
Type: CAZyme
Location: 30719 - 33064 (-)
Type: CAZyme
Location: 30719 - 33064 (-)
Gene ID: Rep_2195_c_11_29
Type:
Location: 33192 - 33641 (-)
Type:
Location: 33192 - 33641 (-)
Gene ID: Rep_2195_c_11_30
Type: CAZyme
Location: 33761 - 34330 (-)
Type: CAZyme
Location: 33761 - 34330 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.