Cluster: Rep_2195_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2195_c_7 | Rep_2195_c_7_8 | 7324 | 8256 | + | 3.A.1.130.1 |
| TC | Rep_2195_c_7 | Rep_2195_c_7_9 | 8275 | 9189 | + | 3.A.1.130.1 |
| TF | Rep_2195_c_7 | Rep_2195_c_7_10 | 9203 | 9646 | + | LytTR |
| pfam | Rep_2195_c_7 | Rep_2195_c_7_11 | 9658 | 10080 | + | DUF3021 |
| CAZyme | Rep_2195_c_7 | Rep_2195_c_7_12 | 10196 | 11950 | + | PL33_2 |
Gene ID: Rep_2195_c_7_8
Type: TC
Location: 7324 - 8256 (+)
Type: TC
Location: 7324 - 8256 (+)
Gene ID: Rep_2195_c_7_9
Type: TC
Location: 8275 - 9189 (+)
Type: TC
Location: 8275 - 9189 (+)
Gene ID: Rep_2195_c_7_10
Type: TF
Location: 9203 - 9646 (+)
Type: TF
Location: 9203 - 9646 (+)
Gene ID: Rep_2195_c_7_11
Type: pfam
Location: 9658 - 10080 (+)
Type: pfam
Location: 9658 - 10080 (+)
Gene ID: Rep_2195_c_7_12
Type: CAZyme
Location: 10196 - 11950 (+)
Type: CAZyme
Location: 10196 - 11950 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.