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Cluster: Rep_2195_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2195_c_6 Rep_2195_c_6_71 84742 85740 - 9.B.18.2.1
NULL(UNKNOWN) Rep_2195_c_6 Rep_2195_c_6_72 85856 87211 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2195_c_6 Rep_2195_c_6_73 87177 88643 - 2.A.50.2.1
CAZyme Rep_2195_c_6 Rep_2195_c_6_74 88651 89673 - GT2
TC Rep_2195_c_6 Rep_2195_c_6_75 89701 91440 - 3.A.1.106.15
CAZyme Rep_2195_c_6 Rep_2195_c_6_76 91453 92565 - GT100
CAZyme Rep_2195_c_6 Rep_2195_c_6_77 92568 93764 - GT4
CAZyme Rep_2195_c_6 Rep_2195_c_6_78 93742 95043 - GT4
CAZyme Rep_2195_c_6 Rep_2195_c_6_79 95071 95892 - GT2
Gene ID: Rep_2195_c_6_71
Type: TC
Location: 84742 - 85740 (-)
Gene ID: Rep_2195_c_6_72
Type:
Location: 85856 - 87211 (-)
Gene ID: Rep_2195_c_6_73
Type: TC
Location: 87177 - 88643 (-)
Gene ID: Rep_2195_c_6_74
Type: CAZyme
Location: 88651 - 89673 (-)
Gene ID: Rep_2195_c_6_75
Type: TC
Location: 89701 - 91440 (-)
Gene ID: Rep_2195_c_6_76
Type: CAZyme
Location: 91453 - 92565 (-)
Gene ID: Rep_2195_c_6_77
Type: CAZyme
Location: 92568 - 93764 (-)
Gene ID: Rep_2195_c_6_78
Type: CAZyme
Location: 93742 - 95043 (-)
Gene ID: Rep_2195_c_6_79
Type: CAZyme
Location: 95071 - 95892 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
COE1
→
Species
COE1 sp900753305

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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