Cluster: Rep_2195_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2195
- CGC Family ID: CGCFAM_01662
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_0 | Rep_2195_c_0_130 | 140744 | 141700 | - | GT2 |
| CAZyme | Rep_2195_c_0 | Rep_2195_c_0_131 | 141704 | 142675 | - | GT2 |
| CAZyme | Rep_2195_c_0 | Rep_2195_c_0_132 | 142718 | 145003 | - | GH5_4 |
| TC | Rep_2195_c_0 | Rep_2195_c_0_133 | 145063 | 146598 | - | 2.A.66.1.40 |
Gene ID: Rep_2195_c_0_130
Type: CAZyme
Location: 140744 - 141700 (-)
Type: CAZyme
Location: 140744 - 141700 (-)
Gene ID: Rep_2195_c_0_131
Type: CAZyme
Location: 141704 - 142675 (-)
Type: CAZyme
Location: 141704 - 142675 (-)
Gene ID: Rep_2195_c_0_132
Type: CAZyme
Location: 142718 - 145003 (-)
Type: CAZyme
Location: 142718 - 145003 (-)
Gene ID: Rep_2195_c_0_133
Type: TC
Location: 145063 - 146598 (-)
Type: TC
Location: 145063 - 146598 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.