Cluster: Rep_2195_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_55 | 64118 | 65206 | - | GT4 |
| pfam | Rep_2195_c_6 | Rep_2195_c_6_56 | 65212 | 66183 | - | ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N |
| TC | Rep_2195_c_6 | Rep_2195_c_6_57 | 66180 | 66818 | - | 9.B.18.1.2 |
| STP | Rep_2195_c_6 | Rep_2195_c_6_58 | 66839 | 68101 | - | Aminotran_1_2 |
| TC | Rep_2195_c_6 | Rep_2195_c_6_59 | 68120 | 69979 | - | 9.B.18.2.1 |
| NULL(UNKNOWN) | Rep_2195_c_6 | Rep_2195_c_6_60 | 69995 | 72481 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_61 | 72568 | 74079 | - | GT2 |
Gene ID: Rep_2195_c_6_55
Type: CAZyme
Location: 64118 - 65206 (-)
Type: CAZyme
Location: 64118 - 65206 (-)
Gene ID: Rep_2195_c_6_56
Type: pfam
Location: 65212 - 66183 (-)
Type: pfam
Location: 65212 - 66183 (-)
Gene ID: Rep_2195_c_6_57
Type: TC
Location: 66180 - 66818 (-)
Type: TC
Location: 66180 - 66818 (-)
Gene ID: Rep_2195_c_6_58
Type: STP
Location: 66839 - 68101 (-)
Type: STP
Location: 66839 - 68101 (-)
Gene ID: Rep_2195_c_6_59
Type: TC
Location: 68120 - 69979 (-)
Type: TC
Location: 68120 - 69979 (-)
Gene ID: Rep_2195_c_6_60
Type:
Location: 69995 - 72481 (-)
Type:
Location: 69995 - 72481 (-)
Gene ID: Rep_2195_c_6_61
Type: CAZyme
Location: 72568 - 74079 (-)
Type: CAZyme
Location: 72568 - 74079 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.