Cluster: Rep_2195_CGC28
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 9
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_24 | 26495 | 27619 | - | GT4 |
| pfam | Rep_2195_c_6 | Rep_2195_c_6_25 | 27677 | 29245 | - | Glucos_trans_II |
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_26 | 29248 | 30000 | - | GT2 |
| NULL(UNKNOWN) | Rep_2195_c_6 | Rep_2195_c_6_27 | 30002 | 31126 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_28 | 31146 | 32318 | - | GT4 |
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_29 | 32338 | 33156 | - | GT2 |
| pfam | Rep_2195_c_6 | Rep_2195_c_6_30 | 33178 | 34017 | - | DUF3431 |
| pfam | Rep_2195_c_6 | Rep_2195_c_6_31 | 34010 | 35752 | - | PTPS_related |
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_32 | 35754 | 36704 | - | GT2 |
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_33 | 36708 | 37661 | - | GT17 |
| pfam | Rep_2195_c_6 | Rep_2195_c_6_34 | 37682 | 38425 | - | DUF5672 |
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_35 | 38443 | 39480 | - | GT11 |
| TC | Rep_2195_c_6 | Rep_2195_c_6_36 | 39515 | 41257 | - | 3.A.1.106.15 |
| NULL(UNKNOWN) | Rep_2195_c_6 | Rep_2195_c_6_37 | 41259 | 42344 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2195_c_6 | Rep_2195_c_6_38 | 42353 | 43816 | - | MBOAT | MBOAT_2 |
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_39 | 43829 | 44851 | - | GT2 |
| CAZyme | Rep_2195_c_6 | Rep_2195_c_6_40 | 44832 | 45731 | - | GT11 |
Gene ID: Rep_2195_c_6_24
Type: CAZyme
Location: 26495 - 27619 (-)
Type: CAZyme
Location: 26495 - 27619 (-)
Gene ID: Rep_2195_c_6_25
Type: pfam
Location: 27677 - 29245 (-)
Type: pfam
Location: 27677 - 29245 (-)
Gene ID: Rep_2195_c_6_26
Type: CAZyme
Location: 29248 - 30000 (-)
Type: CAZyme
Location: 29248 - 30000 (-)
Gene ID: Rep_2195_c_6_27
Type:
Location: 30002 - 31126 (-)
Type:
Location: 30002 - 31126 (-)
Gene ID: Rep_2195_c_6_28
Type: CAZyme
Location: 31146 - 32318 (-)
Type: CAZyme
Location: 31146 - 32318 (-)
Gene ID: Rep_2195_c_6_29
Type: CAZyme
Location: 32338 - 33156 (-)
Type: CAZyme
Location: 32338 - 33156 (-)
Gene ID: Rep_2195_c_6_30
Type: pfam
Location: 33178 - 34017 (-)
Type: pfam
Location: 33178 - 34017 (-)
Gene ID: Rep_2195_c_6_31
Type: pfam
Location: 34010 - 35752 (-)
Type: pfam
Location: 34010 - 35752 (-)
Gene ID: Rep_2195_c_6_32
Type: CAZyme
Location: 35754 - 36704 (-)
Type: CAZyme
Location: 35754 - 36704 (-)
Gene ID: Rep_2195_c_6_33
Type: CAZyme
Location: 36708 - 37661 (-)
Type: CAZyme
Location: 36708 - 37661 (-)
Gene ID: Rep_2195_c_6_34
Type: pfam
Location: 37682 - 38425 (-)
Type: pfam
Location: 37682 - 38425 (-)
Gene ID: Rep_2195_c_6_35
Type: CAZyme
Location: 38443 - 39480 (-)
Type: CAZyme
Location: 38443 - 39480 (-)
Gene ID: Rep_2195_c_6_36
Type: TC
Location: 39515 - 41257 (-)
Type: TC
Location: 39515 - 41257 (-)
Gene ID: Rep_2195_c_6_37
Type:
Location: 41259 - 42344 (-)
Type:
Location: 41259 - 42344 (-)
Gene ID: Rep_2195_c_6_38
Type: pfam
Location: 42353 - 43816 (-)
Type: pfam
Location: 42353 - 43816 (-)
Gene ID: Rep_2195_c_6_39
Type: CAZyme
Location: 43829 - 44851 (-)
Type: CAZyme
Location: 43829 - 44851 (-)
Gene ID: Rep_2195_c_6_40
Type: CAZyme
Location: 44832 - 45731 (-)
Type: CAZyme
Location: 44832 - 45731 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.