Cluster: Rep_2195_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- CGC Family ID: CGCFAM_10672
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2195_c_4 | Rep_2195_c_4_136 | 147923 | 148834 | - | 3.A.1.1.26 |
| TC | Rep_2195_c_4 | Rep_2195_c_4_137 | 149003 | 150610 | - | 3.A.18.1.1 |
| CAZyme | Rep_2195_c_4 | Rep_2195_c_4_138 | 150743 | 152818 | - | GH13_39 |
| NULL(UNKNOWN) | Rep_2195_c_4 | Rep_2195_c_4_139 | 152846 | 153508 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2195_c_4 | Rep_2195_c_4_140 | 153670 | 155412 | - | 1.B.52.2.1 |
Gene ID: Rep_2195_c_4_136
Type: TC
Location: 147923 - 148834 (-)
Type: TC
Location: 147923 - 148834 (-)
Gene ID: Rep_2195_c_4_137
Type: TC
Location: 149003 - 150610 (-)
Type: TC
Location: 149003 - 150610 (-)
Gene ID: Rep_2195_c_4_138
Type: CAZyme
Location: 150743 - 152818 (-)
Type: CAZyme
Location: 150743 - 152818 (-)
Gene ID: Rep_2195_c_4_139
Type:
Location: 152846 - 153508 (-)
Type:
Location: 152846 - 153508 (-)
Gene ID: Rep_2195_c_4_140
Type: TC
Location: 153670 - 155412 (-)
Type: TC
Location: 153670 - 155412 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.