Cluster: Rep_2195_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_4 | Rep_2195_c_4_23 | 21501 | 23096 | - | CBM50 |
| pfam | Rep_2195_c_4 | Rep_2195_c_4_24 | 23179 | 24084 | - | DHO_dh | Dus |
| pfam | Rep_2195_c_4 | Rep_2195_c_4_25 | 24084 | 24860 | - | NAD_binding_1 | DHODB_Fe-S_bind |
| CAZyme | Rep_2195_c_4 | Rep_2195_c_4_26 | 24954 | 25682 | - | CE12 |
| TC | Rep_2195_c_4 | Rep_2195_c_4_27 | 25743 | 26600 | - | 3.A.1.1.29 |
| TC | Rep_2195_c_4 | Rep_2195_c_4_28 | 26612 | 27574 | - | 3.A.1.1.10 |
Gene ID: Rep_2195_c_4_23
Type: CAZyme
Location: 21501 - 23096 (-)
Type: CAZyme
Location: 21501 - 23096 (-)
Gene ID: Rep_2195_c_4_24
Type: pfam
Location: 23179 - 24084 (-)
Type: pfam
Location: 23179 - 24084 (-)
Gene ID: Rep_2195_c_4_25
Type: pfam
Location: 24084 - 24860 (-)
Type: pfam
Location: 24084 - 24860 (-)
Gene ID: Rep_2195_c_4_26
Type: CAZyme
Location: 24954 - 25682 (-)
Type: CAZyme
Location: 24954 - 25682 (-)
Gene ID: Rep_2195_c_4_27
Type: TC
Location: 25743 - 26600 (-)
Type: TC
Location: 25743 - 26600 (-)
Gene ID: Rep_2195_c_4_28
Type: TC
Location: 26612 - 27574 (-)
Type: TC
Location: 26612 - 27574 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2195_c_4_27 | vegetarian > vegan | 1.03188 | 0.01287 |