Cluster: Rep_2195_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2195_c_4 | Rep_2195_c_4_1 | 14 | 859 | - | 3.A.1.1.27 |
| TC | Rep_2195_c_4 | Rep_2195_c_4_2 | 856 | 2160 | - | 3.A.1.1.27 |
| STP | Rep_2195_c_4 | Rep_2195_c_4_3 | 2184 | 3668 | - | SBP_bac_1 |
| CAZyme | Rep_2195_c_4 | Rep_2195_c_4_4 | 3697 | 5400 | - | CBM34 | GH13_20 |
Gene ID: Rep_2195_c_4_1
Type: TC
Location: 14 - 859 (-)
Type: TC
Location: 14 - 859 (-)
Gene ID: Rep_2195_c_4_2
Type: TC
Location: 856 - 2160 (-)
Type: TC
Location: 856 - 2160 (-)
Gene ID: Rep_2195_c_4_3
Type: STP
Location: 2184 - 3668 (-)
Type: STP
Location: 2184 - 3668 (-)
Gene ID: Rep_2195_c_4_4
Type: CAZyme
Location: 3697 - 5400 (-)
Type: CAZyme
Location: 3697 - 5400 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.