Cluster: Rep_2195_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2195_c_3 | Rep_2195_c_3_139 | 162021 | 163169 | + | 9.B.141.1.1 |
| TC | Rep_2195_c_3 | Rep_2195_c_3_140 | 163303 | 165393 | + | 1.B.52.2.1 |
| TC | Rep_2195_c_3 | Rep_2195_c_3_141 | 165603 | 167435 | + | 3.D.1.5.1 |
| TC | Rep_2195_c_3 | Rep_2195_c_3_142 | 167429 | 169174 | + | 3.D.1.7.1 |
| pfam | Rep_2195_c_3 | Rep_2195_c_3_143 | 169275 | 169790 | + | UDG |
| pfam | Rep_2195_c_3 | Rep_2195_c_3_144 | 169809 | 170360 | + | DUF436 |
| CAZyme | Rep_2195_c_3 | Rep_2195_c_3_145 | 170449 | 171384 | + | CE4 |
Gene ID: Rep_2195_c_3_139
Type: TC
Location: 162021 - 163169 (+)
Type: TC
Location: 162021 - 163169 (+)
Gene ID: Rep_2195_c_3_140
Type: TC
Location: 163303 - 165393 (+)
Type: TC
Location: 163303 - 165393 (+)
Gene ID: Rep_2195_c_3_141
Type: TC
Location: 165603 - 167435 (+)
Type: TC
Location: 165603 - 167435 (+)
Gene ID: Rep_2195_c_3_142
Type: TC
Location: 167429 - 169174 (+)
Type: TC
Location: 167429 - 169174 (+)
Gene ID: Rep_2195_c_3_143
Type: pfam
Location: 169275 - 169790 (+)
Type: pfam
Location: 169275 - 169790 (+)
Gene ID: Rep_2195_c_3_144
Type: pfam
Location: 169809 - 170360 (+)
Type: pfam
Location: 169809 - 170360 (+)
Gene ID: Rep_2195_c_3_145
Type: CAZyme
Location: 170449 - 171384 (+)
Type: CAZyme
Location: 170449 - 171384 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.