Cluster: Rep_2195_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2195_c_3 | Rep_2195_c_3_114 | 130631 | 132022 | + | 3.A.1.1.27 |
| TC | Rep_2195_c_3 | Rep_2195_c_3_115 | 132023 | 132865 | + | 3.A.1.1.27 |
| CAZyme | Rep_2195_c_3 | Rep_2195_c_3_116 | 132870 | 134540 | + | CBM34 | GH13_20 |
Gene ID: Rep_2195_c_3_114
Type: TC
Location: 130631 - 132022 (+)
Type: TC
Location: 130631 - 132022 (+)
Gene ID: Rep_2195_c_3_115
Type: TC
Location: 132023 - 132865 (+)
Type: TC
Location: 132023 - 132865 (+)
Gene ID: Rep_2195_c_3_116
Type: CAZyme
Location: 132870 - 134540 (+)
Type: CAZyme
Location: 132870 - 134540 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.