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Cluster: Rep_2195_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2195_c_3 Rep_2195_c_3_64 69954 71447 - 1.B.52.2.2
NULL(UNKNOWN) Rep_2195_c_3 Rep_2195_c_3_65 71757 72014 + NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_2195_c_3 Rep_2195_c_3_66 72143 72601 + MarR
TC Rep_2195_c_3 Rep_2195_c_3_67 72594 74915 + 3.A.1.135.6
TC Rep_2195_c_3 Rep_2195_c_3_68 74908 76764 + 3.A.1.135.6
STP Rep_2195_c_3 Rep_2195_c_3_69 77446 79131 + GGDEF
TC Rep_2195_c_3 Rep_2195_c_3_70 79147 80580 + 1.B.52.2.1
STP Rep_2195_c_3 Rep_2195_c_3_71 80855 81379 + Spo0A_C
CAZyme Rep_2195_c_3 Rep_2195_c_3_72 81495 82943 + GT5
Gene ID: Rep_2195_c_3_64
Type: TC
Location: 69954 - 71447 (-)
Gene ID: Rep_2195_c_3_65
Type:
Location: 71757 - 72014 (+)
Gene ID: Rep_2195_c_3_66
Type: TF
Location: 72143 - 72601 (+)
Gene ID: Rep_2195_c_3_67
Type: TC
Location: 72594 - 74915 (+)
Gene ID: Rep_2195_c_3_68
Type: TC
Location: 74908 - 76764 (+)
Gene ID: Rep_2195_c_3_69
Type: STP
Location: 77446 - 79131 (+)
Gene ID: Rep_2195_c_3_70
Type: TC
Location: 79147 - 80580 (+)
Gene ID: Rep_2195_c_3_71
Type: STP
Location: 80855 - 81379 (+)
Gene ID: Rep_2195_c_3_72
Type: CAZyme
Location: 81495 - 82943 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
COE1
→
Species
COE1 sp900753305

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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