Cluster: Rep_2195_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2195
- CGC Family ID: CGCFAM_00899
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2195_c_3 | Rep_2195_c_3_41 | 46106 | 46660 | + | CBM61 |
| CAZyme | Rep_2195_c_3 | Rep_2195_c_3_42 | 46663 | 47736 | + | GH53 |
| TC | Rep_2195_c_3 | Rep_2195_c_3_43 | 47751 | 48950 | + | 3.A.1.1.6 |
| TC | Rep_2195_c_3 | Rep_2195_c_3_44 | 48958 | 49869 | + | 3.A.1.1.22 |
| TC | Rep_2195_c_3 | Rep_2195_c_3_45 | 49870 | 50715 | + | 3.A.1.1.6 |
| CAZyme | Rep_2195_c_3 | Rep_2195_c_3_46 | 50806 | 52809 | + | GH31_4 |
Gene ID: Rep_2195_c_3_41
Type: CAZyme
Location: 46106 - 46660 (+)
Type: CAZyme
Location: 46106 - 46660 (+)
Gene ID: Rep_2195_c_3_42
Type: CAZyme
Location: 46663 - 47736 (+)
Type: CAZyme
Location: 46663 - 47736 (+)
Gene ID: Rep_2195_c_3_43
Type: TC
Location: 47751 - 48950 (+)
Type: TC
Location: 47751 - 48950 (+)
Gene ID: Rep_2195_c_3_44
Type: TC
Location: 48958 - 49869 (+)
Type: TC
Location: 48958 - 49869 (+)
Gene ID: Rep_2195_c_3_45
Type: TC
Location: 49870 - 50715 (+)
Type: TC
Location: 49870 - 50715 (+)
Gene ID: Rep_2195_c_3_46
Type: CAZyme
Location: 50806 - 52809 (+)
Type: CAZyme
Location: 50806 - 52809 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.