Cluster: Rep_2195_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2195
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2195_c_3 | Rep_2195_c_3_29 | 32549 | 34246 | + | 1.B.52.2.2 |
| pfam | Rep_2195_c_3 | Rep_2195_c_3_30 | 34395 | 35393 | + | DnaJ | DnaJ_C |
| TC | Rep_2195_c_3 | Rep_2195_c_3_31 | 35587 | 36954 | + | 2.A.66.1.13 |
| TC | Rep_2195_c_3 | Rep_2195_c_3_32 | 36968 | 37555 | + | 2.A.115.2.14 |
| TF | Rep_2195_c_3 | Rep_2195_c_3_33 | 37697 | 38125 | + | MarR |
| pfam | Rep_2195_c_3 | Rep_2195_c_3_34 | 38127 | 38903 | + | TauE |
| CAZyme | Rep_2195_c_3 | Rep_2195_c_3_35 | 39266 | 41254 | + | CBM61 |
Gene ID: Rep_2195_c_3_29
Type: TC
Location: 32549 - 34246 (+)
Type: TC
Location: 32549 - 34246 (+)
Gene ID: Rep_2195_c_3_30
Type: pfam
Location: 34395 - 35393 (+)
Type: pfam
Location: 34395 - 35393 (+)
Gene ID: Rep_2195_c_3_31
Type: TC
Location: 35587 - 36954 (+)
Type: TC
Location: 35587 - 36954 (+)
Gene ID: Rep_2195_c_3_32
Type: TC
Location: 36968 - 37555 (+)
Type: TC
Location: 36968 - 37555 (+)
Gene ID: Rep_2195_c_3_33
Type: TF
Location: 37697 - 38125 (+)
Type: TF
Location: 37697 - 38125 (+)
Gene ID: Rep_2195_c_3_34
Type: pfam
Location: 38127 - 38903 (+)
Type: pfam
Location: 38127 - 38903 (+)
Gene ID: Rep_2195_c_3_35
Type: CAZyme
Location: 39266 - 41254 (+)
Type: CAZyme
Location: 39266 - 41254 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
COE1
Species
COE1 sp900753305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.