Cluster: Rep_2186_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2186
- CGC Family ID: CGCFAM_00911
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2186_c_13 | Rep_2186_c_13_5 | 2717 | 4432 | + | GH13_31 |
| TF | Rep_2186_c_13 | Rep_2186_c_13_6 | 4809 | 5576 | + | HTH_DeoR |
| STP | Rep_2186_c_13 | Rep_2186_c_13_7 | 5573 | 6478 | + | PfkB |
| TC | Rep_2186_c_13 | Rep_2186_c_13_8 | 6491 | 8431 | + | 4.A.2.1.20 |
| STP | Rep_2186_c_13 | Rep_2186_c_13_9 | 8494 | 8751 | + | PTS-HPr |
| TC | Rep_2186_c_13 | Rep_2186_c_13_10 | 8808 | 10430 | + | 8.A.7.1.1 |
| TC | Rep_2186_c_13 | Rep_2186_c_13_11 | 10742 | 12247 | + | 2.A.21.2.5 |
Gene ID: Rep_2186_c_13_5
Type: CAZyme
Location: 2717 - 4432 (+)
Type: CAZyme
Location: 2717 - 4432 (+)
Gene ID: Rep_2186_c_13_6
Type: TF
Location: 4809 - 5576 (+)
Type: TF
Location: 4809 - 5576 (+)
Gene ID: Rep_2186_c_13_7
Type: STP
Location: 5573 - 6478 (+)
Type: STP
Location: 5573 - 6478 (+)
Gene ID: Rep_2186_c_13_8
Type: TC
Location: 6491 - 8431 (+)
Type: TC
Location: 6491 - 8431 (+)
Gene ID: Rep_2186_c_13_9
Type: STP
Location: 8494 - 8751 (+)
Type: STP
Location: 8494 - 8751 (+)
Gene ID: Rep_2186_c_13_10
Type: TC
Location: 8808 - 10430 (+)
Type: TC
Location: 8808 - 10430 (+)
Gene ID: Rep_2186_c_13_11
Type: TC
Location: 10742 - 12247 (+)
Type: TC
Location: 10742 - 12247 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.