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Cluster: Rep_2161_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2161_c_12 Rep_2161_c_12_1 2 589 + 9.A.11.1.1
TC Rep_2161_c_12 Rep_2161_c_12_2 579 1001 + 9.A.11.1.1
TC Rep_2161_c_12 Rep_2161_c_12_3 1085 1543 + 9.A.11.1.1
pfam Rep_2161_c_12 Rep_2161_c_12_4 1769 3529 + VanW | G5
TC Rep_2161_c_12 Rep_2161_c_12_5 3619 4932 - 2.A.49.9.2
TC Rep_2161_c_12 Rep_2161_c_12_6 5077 6099 + 9.A.11.1.1
pfam Rep_2161_c_12 Rep_2161_c_12_7 6256 6612 + SpoVAC_SpoVAEB
CAZyme Rep_2161_c_12 Rep_2161_c_12_8 6706 9681 - GT51
Gene ID: Rep_2161_c_12_1
Type: TC
Location: 2 - 589 (+)
Gene ID: Rep_2161_c_12_2
Type: TC
Location: 579 - 1001 (+)
Gene ID: Rep_2161_c_12_3
Type: TC
Location: 1085 - 1543 (+)
Gene ID: Rep_2161_c_12_4
Type: pfam
Location: 1769 - 3529 (+)
Gene ID: Rep_2161_c_12_5
Type: TC
Location: 3619 - 4932 (-)
Gene ID: Rep_2161_c_12_6
Type: TC
Location: 5077 - 6099 (+)
Gene ID: Rep_2161_c_12_7
Type: pfam
Location: 6256 - 6612 (+)
Gene ID: Rep_2161_c_12_8
Type: CAZyme
Location: 6706 - 9681 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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