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Cluster: Rep_2161_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2161_c_11 Rep_2161_c_11_59 59900 60697 - GT2
pfam Rep_2161_c_11 Rep_2161_c_11_60 60706 61197 - Hexapep | Hexapep_2
CAZyme Rep_2161_c_11 Rep_2161_c_11_61 61602 62687 - GT4
TC Rep_2161_c_11 Rep_2161_c_11_62 62724 64190 - 9.B.18.1.2
pfam Rep_2161_c_11 Rep_2161_c_11_63 64445 65674 - UDPGP
CAZyme Rep_2161_c_11 Rep_2161_c_11_64 65728 66498 - GT2
pfam Rep_2161_c_11 Rep_2161_c_11_65 66521 66757 - HicB
CAZyme Rep_2161_c_11 Rep_2161_c_11_66 66776 67519 - GT2
TC Rep_2161_c_11 Rep_2161_c_11_67 67516 68964 - 9.B.18.1.3
Gene ID: Rep_2161_c_11_59
Type: CAZyme
Location: 59900 - 60697 (-)
Gene ID: Rep_2161_c_11_60
Type: pfam
Location: 60706 - 61197 (-)
Gene ID: Rep_2161_c_11_61
Type: CAZyme
Location: 61602 - 62687 (-)
Gene ID: Rep_2161_c_11_62
Type: TC
Location: 62724 - 64190 (-)
Gene ID: Rep_2161_c_11_63
Type: pfam
Location: 64445 - 65674 (-)
Gene ID: Rep_2161_c_11_64
Type: CAZyme
Location: 65728 - 66498 (-)
Gene ID: Rep_2161_c_11_65
Type: pfam
Location: 66521 - 66757 (-)
Gene ID: Rep_2161_c_11_66
Type: CAZyme
Location: 66776 - 67519 (-)
Gene ID: Rep_2161_c_11_67
Type: TC
Location: 67516 - 68964 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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