Cluster: Rep_2161_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2161
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2161_c_197 | Rep_2161_c_197_3 | 2614 | 3231 | + | 2.A.115.2.14 |
| TC | Rep_2161_c_197 | Rep_2161_c_197_4 | 3233 | 4756 | + | 2.A.3.5.1 |
| pfam | Rep_2161_c_197 | Rep_2161_c_197_5 | 4770 | 5954 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| CAZyme | Rep_2161_c_197 | Rep_2161_c_197_6 | 6239 | 7762 | + | GH32 |
Gene ID: Rep_2161_c_197_3
Type: TC
Location: 2614 - 3231 (+)
Type: TC
Location: 2614 - 3231 (+)
Gene ID: Rep_2161_c_197_4
Type: TC
Location: 3233 - 4756 (+)
Type: TC
Location: 3233 - 4756 (+)
Gene ID: Rep_2161_c_197_5
Type: pfam
Location: 4770 - 5954 (+)
Type: pfam
Location: 4770 - 5954 (+)
Gene ID: Rep_2161_c_197_6
Type: CAZyme
Location: 6239 - 7762 (+)
Type: CAZyme
Location: 6239 - 7762 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900761435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.