Cluster: Rep_2161_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2161
- CGC Family ID: CGCFAM_03852
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2161_c_170 | Rep_2161_c_170_3 | 1259 | 2314 | - | CE4 |
| NULL(UNKNOWN) | Rep_2161_c_170 | Rep_2161_c_170_4 | 2826 | 3236 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2161_c_170 | Rep_2161_c_170_5 | 3277 | 3426 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2161_c_170 | Rep_2161_c_170_6 | 3697 | 5094 | + | 2.A.22.5.3 |
| TC | Rep_2161_c_170 | Rep_2161_c_170_7 | 5185 | 5967 | + | 2.A.5.5.2 |
Gene ID: Rep_2161_c_170_3
Type: CAZyme
Location: 1259 - 2314 (-)
Type: CAZyme
Location: 1259 - 2314 (-)
Gene ID: Rep_2161_c_170_4
Type:
Location: 2826 - 3236 (+)
Type:
Location: 2826 - 3236 (+)
Gene ID: Rep_2161_c_170_5
Type:
Location: 3277 - 3426 (+)
Type:
Location: 3277 - 3426 (+)
Gene ID: Rep_2161_c_170_6
Type: TC
Location: 3697 - 5094 (+)
Type: TC
Location: 3697 - 5094 (+)
Gene ID: Rep_2161_c_170_7
Type: TC
Location: 5185 - 5967 (+)
Type: TC
Location: 5185 - 5967 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900761435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.