Cluster: Rep_2161_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2161
- CGC Family ID: CGCFAM_00454
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2161_c_141 | Rep_2161_c_141_10 | 14373 | 15032 | - | 3.A.1.122.14 |
| pfam | Rep_2161_c_141 | Rep_2161_c_141_11 | 15029 | 16282 | - | FtsX |
| pfam | Rep_2161_c_141 | Rep_2161_c_141_12 | 16295 | 17509 | - | FtsX |
| CAZyme | Rep_2161_c_141 | Rep_2161_c_141_13 | 17586 | 20129 | - | GH3 |
Gene ID: Rep_2161_c_141_10
Type: TC
Location: 14373 - 15032 (-)
Type: TC
Location: 14373 - 15032 (-)
Gene ID: Rep_2161_c_141_11
Type: pfam
Location: 15029 - 16282 (-)
Type: pfam
Location: 15029 - 16282 (-)
Gene ID: Rep_2161_c_141_12
Type: pfam
Location: 16295 - 17509 (-)
Type: pfam
Location: 16295 - 17509 (-)
Gene ID: Rep_2161_c_141_13
Type: CAZyme
Location: 17586 - 20129 (-)
Type: CAZyme
Location: 17586 - 20129 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900761435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.