Cluster: Rep_2161_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2161
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2161_c_122 | Rep_2161_c_122_10 | 9804 | 12203 | + | GH94 |
| peptidase | Rep_2161_c_122 | Rep_2161_c_122_11 | 12344 | 13003 | + | S14.UPW |
| pfam | Rep_2161_c_122 | Rep_2161_c_122_12 | 13098 | 13973 | + | BacA |
| TC | Rep_2161_c_122 | Rep_2161_c_122_13 | 13983 | 16682 | + | 3.A.12.1.1 |
Gene ID: Rep_2161_c_122_10
Type: CAZyme
Location: 9804 - 12203 (+)
Type: CAZyme
Location: 9804 - 12203 (+)
Gene ID: Rep_2161_c_122_11
Type: peptidase
Location: 12344 - 13003 (+)
Type: peptidase
Location: 12344 - 13003 (+)
Gene ID: Rep_2161_c_122_12
Type: pfam
Location: 13098 - 13973 (+)
Type: pfam
Location: 13098 - 13973 (+)
Gene ID: Rep_2161_c_122_13
Type: TC
Location: 13983 - 16682 (+)
Type: TC
Location: 13983 - 16682 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900761435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.