Cluster: Rep_2161_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2161
- CGC Family ID: CGCFAM_00618
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2161_c_11 | Rep_2161_c_11_53 | 53257 | 54099 | - | GT2 |
| pfam | Rep_2161_c_11 | Rep_2161_c_11_54 | 54108 | 54749 | - | Hexapep | Hexapep_2 |
| TC | Rep_2161_c_11 | Rep_2161_c_11_55 | 54970 | 56100 | - | 9.B.183.1.6 |
Gene ID: Rep_2161_c_11_53
Type: CAZyme
Location: 53257 - 54099 (-)
Type: CAZyme
Location: 53257 - 54099 (-)
Gene ID: Rep_2161_c_11_54
Type: pfam
Location: 54108 - 54749 (-)
Type: pfam
Location: 54108 - 54749 (-)
Gene ID: Rep_2161_c_11_55
Type: TC
Location: 54970 - 56100 (-)
Type: TC
Location: 54970 - 56100 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900761435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.