Cluster: Rep_2160_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2160
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2160_c_0 | Rep_2160_c_0_1615 | 1800193 | 1801692 | + | 3.A.1.2.20 |
| TC | Rep_2160_c_0 | Rep_2160_c_0_1616 | 1801694 | 1802713 | + | 3.A.1.2.15 |
| CAZyme | Rep_2160_c_0 | Rep_2160_c_0_1617 | 1802735 | 1804213 | + | GH32 |
Gene ID: Rep_2160_c_0_1615
Type: TC
Location: 1800193 - 1801692 (+)
Type: TC
Location: 1800193 - 1801692 (+)
Gene ID: Rep_2160_c_0_1616
Type: TC
Location: 1801694 - 1802713 (+)
Type: TC
Location: 1801694 - 1802713 (+)
Gene ID: Rep_2160_c_0_1617
Type: CAZyme
Location: 1802735 - 1804213 (+)
Type: CAZyme
Location: 1802735 - 1804213 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp000154245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.