Cluster: Rep_2158_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2158
- CGC Family ID: CGCFAM_01231
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2158_c_0 | Rep_2158_c_0_323 | 376886 | 378604 | + | 2.A.25.1.3 |
| TC | Rep_2158_c_0 | Rep_2158_c_0_324 | 378808 | 380568 | + | 1.A.33.1.4 |
| NULL(UNKNOWN) | Rep_2158_c_0 | Rep_2158_c_0_325 | 380696 | 381091 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2158_c_0 | Rep_2158_c_0_326 | 381146 | 382078 | + | 1.E.12.1.3 |
| pfam | Rep_2158_c_0 | Rep_2158_c_0_327 | 382103 | 382972 | + | DnaJ |
| CAZyme | Rep_2158_c_0 | Rep_2158_c_0_328 | 383325 | 385772 | + | GT35 |
Gene ID: Rep_2158_c_0_323
Type: TC
Location: 376886 - 378604 (+)
Type: TC
Location: 376886 - 378604 (+)
Gene ID: Rep_2158_c_0_324
Type: TC
Location: 378808 - 380568 (+)
Type: TC
Location: 378808 - 380568 (+)
Gene ID: Rep_2158_c_0_325
Type:
Location: 380696 - 381091 (+)
Type:
Location: 380696 - 381091 (+)
Gene ID: Rep_2158_c_0_326
Type: TC
Location: 381146 - 382078 (+)
Type: TC
Location: 381146 - 382078 (+)
Gene ID: Rep_2158_c_0_327
Type: pfam
Location: 382103 - 382972 (+)
Type: pfam
Location: 382103 - 382972 (+)
Gene ID: Rep_2158_c_0_328
Type: CAZyme
Location: 383325 - 385772 (+)
Type: CAZyme
Location: 383325 - 385772 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus eutactus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.