dbCAN Logo

Cluster: Rep_2158_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2158_c_0 Rep_2158_c_0_312 359496 360308 - 9.B.28.1.2
STP Rep_2158_c_0 Rep_2158_c_0_313 360704 362014 + SBP_bac_1
TC Rep_2158_c_0 Rep_2158_c_0_314 362132 363118 + 3.A.1.1.17
TC Rep_2158_c_0 Rep_2158_c_0_315 363134 363976 + 3.A.1.1.36
NULL(UNKNOWN) Rep_2158_c_0 Rep_2158_c_0_316 364256 364936 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2158_c_0 Rep_2158_c_0_317 365109 367301 + GH36
TC Rep_2158_c_0 Rep_2158_c_0_318 367541 368932 - 2.A.66.1.33
Gene ID: Rep_2158_c_0_312
Type: TC
Location: 359496 - 360308 (-)
Gene ID: Rep_2158_c_0_313
Type: STP
Location: 360704 - 362014 (+)
Gene ID: Rep_2158_c_0_314
Type: TC
Location: 362132 - 363118 (+)
Gene ID: Rep_2158_c_0_315
Type: TC
Location: 363134 - 363976 (+)
Gene ID: Rep_2158_c_0_316
Type:
Location: 364256 - 364936 (+)
Gene ID: Rep_2158_c_0_317
Type: CAZyme
Location: 365109 - 367301 (+)
Gene ID: Rep_2158_c_0_318
Type: TC
Location: 367541 - 368932 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List