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Cluster: Rep_2158_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2158_c_0 Rep_2158_c_0_2602 3002631 3005750 - 8.A.59.4.1
STP Rep_2158_c_0 Rep_2158_c_0_2603 3005943 3006770 + PfkB
pfam Rep_2158_c_0 Rep_2158_c_0_2604 3006874 3007533 + Radical_SAM
TC Rep_2158_c_0 Rep_2158_c_0_2605 3007572 3008450 + 2.A.115.1.1
pfam Rep_2158_c_0 Rep_2158_c_0_2606 3008544 3009896 - MatE | MatE | MurJ
TF Rep_2158_c_0 Rep_2158_c_0_2607 3010002 3010481 - HTH_3
CAZyme Rep_2158_c_0 Rep_2158_c_0_2608 3010692 3011846 - CBM35inCE17 | CE17
CAZyme Rep_2158_c_0 Rep_2158_c_0_2609 3011915 3012961 - CE2
Gene ID: Rep_2158_c_0_2602
Type: TC
Location: 3002631 - 3005750 (-)
Gene ID: Rep_2158_c_0_2603
Type: STP
Location: 3005943 - 3006770 (+)
Gene ID: Rep_2158_c_0_2604
Type: pfam
Location: 3006874 - 3007533 (+)
Gene ID: Rep_2158_c_0_2605
Type: TC
Location: 3007572 - 3008450 (+)
Gene ID: Rep_2158_c_0_2606
Type: pfam
Location: 3008544 - 3009896 (-)
Gene ID: Rep_2158_c_0_2607
Type: TF
Location: 3010002 - 3010481 (-)
Gene ID: Rep_2158_c_0_2608
Type: CAZyme
Location: 3010692 - 3011846 (-)
Gene ID: Rep_2158_c_0_2609
Type: CAZyme
Location: 3011915 - 3012961 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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