Cluster: Rep_2158_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2158
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2158_c_0 | Rep_2158_c_0_2408 | 2759893 | 2761596 | - | 8.A.7.1.1 |
| STP | Rep_2158_c_0 | Rep_2158_c_0_2409 | 2761733 | 2761996 | - | PTS-HPr |
| TC | Rep_2158_c_0 | Rep_2158_c_0_2410 | 2762339 | 2764405 | - | 4.A.2.1.20 |
| STP | Rep_2158_c_0 | Rep_2158_c_0_2411 | 2764509 | 2765411 | - | PfkB |
| TF | Rep_2158_c_0 | Rep_2158_c_0_2412 | 2765411 | 2766160 | - | HTH_DeoR |
| TC | Rep_2158_c_0 | Rep_2158_c_0_2413 | 2766582 | 2767511 | - | 2.A.4.7.9 |
| CAZyme | Rep_2158_c_0 | Rep_2158_c_0_2414 | 2767844 | 2770612 | - | GH3 |
Gene ID: Rep_2158_c_0_2408
Type: TC
Location: 2759893 - 2761596 (-)
Type: TC
Location: 2759893 - 2761596 (-)
Gene ID: Rep_2158_c_0_2409
Type: STP
Location: 2761733 - 2761996 (-)
Type: STP
Location: 2761733 - 2761996 (-)
Gene ID: Rep_2158_c_0_2410
Type: TC
Location: 2762339 - 2764405 (-)
Type: TC
Location: 2762339 - 2764405 (-)
Gene ID: Rep_2158_c_0_2411
Type: STP
Location: 2764509 - 2765411 (-)
Type: STP
Location: 2764509 - 2765411 (-)
Gene ID: Rep_2158_c_0_2412
Type: TF
Location: 2765411 - 2766160 (-)
Type: TF
Location: 2765411 - 2766160 (-)
Gene ID: Rep_2158_c_0_2413
Type: TC
Location: 2766582 - 2767511 (-)
Type: TC
Location: 2766582 - 2767511 (-)
Gene ID: Rep_2158_c_0_2414
Type: CAZyme
Location: 2767844 - 2770612 (-)
Type: CAZyme
Location: 2767844 - 2770612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus eutactus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.