Cluster: Rep_2158_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2158
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2158_c_0 | Rep_2158_c_0_2282 | 2620141 | 2621103 | - | GT2 |
| NULL(UNKNOWN) | Rep_2158_c_0 | Rep_2158_c_0_2283 | 2621151 | 2622173 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2158_c_0 | Rep_2158_c_0_2284 | 2622465 | 2625041 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | Rep_2158_c_0 | Rep_2158_c_0_2285 | 2625172 | 2626680 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2158_c_0 | Rep_2158_c_0_2286 | 2626887 | 2628335 | - | GH1 |
Gene ID: Rep_2158_c_0_2282
Type: CAZyme
Location: 2620141 - 2621103 (-)
Type: CAZyme
Location: 2620141 - 2621103 (-)
Gene ID: Rep_2158_c_0_2283
Type:
Location: 2621151 - 2622173 (-)
Type:
Location: 2621151 - 2622173 (-)
Gene ID: Rep_2158_c_0_2284
Type: TC
Location: 2622465 - 2625041 (-)
Type: TC
Location: 2622465 - 2625041 (-)
Gene ID: Rep_2158_c_0_2285
Type:
Location: 2625172 - 2626680 (-)
Type:
Location: 2625172 - 2626680 (-)
Gene ID: Rep_2158_c_0_2286
Type: CAZyme
Location: 2626887 - 2628335 (-)
Type: CAZyme
Location: 2626887 - 2628335 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus eutactus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2158_c_0_2285 | vegetarian > vegan | 1.22948 | 0.00516 |