Cluster: Rep_2158_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2158
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2158_c_0 | Rep_2158_c_0_2180 | 2492755 | 2493495 | + | GT2 |
| pfam | Rep_2158_c_0 | Rep_2158_c_0_2181 | 2493540 | 2494763 | + | UDPGP |
| pfam | Rep_2158_c_0 | Rep_2158_c_0_2182 | 2494842 | 2495081 | - | RHH_1 |
| CAZyme | Rep_2158_c_0 | Rep_2158_c_0_2183 | 2495131 | 2495877 | - | GT2 |
| TC | Rep_2158_c_0 | Rep_2158_c_0_2184 | 2495912 | 2497402 | - | 9.B.18.1.3 |
Gene ID: Rep_2158_c_0_2180
Type: CAZyme
Location: 2492755 - 2493495 (+)
Type: CAZyme
Location: 2492755 - 2493495 (+)
Gene ID: Rep_2158_c_0_2181
Type: pfam
Location: 2493540 - 2494763 (+)
Type: pfam
Location: 2493540 - 2494763 (+)
Gene ID: Rep_2158_c_0_2182
Type: pfam
Location: 2494842 - 2495081 (-)
Type: pfam
Location: 2494842 - 2495081 (-)
Gene ID: Rep_2158_c_0_2183
Type: CAZyme
Location: 2495131 - 2495877 (-)
Type: CAZyme
Location: 2495131 - 2495877 (-)
Gene ID: Rep_2158_c_0_2184
Type: TC
Location: 2495912 - 2497402 (-)
Type: TC
Location: 2495912 - 2497402 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus eutactus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.