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Cluster: Rep_2158_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2158_c_0 Rep_2158_c_0_2039 2333470 2336241 + GT51
pfam Rep_2158_c_0 Rep_2158_c_0_2040 2336340 2336696 - SpoVAC_SpoVAEB
TC Rep_2158_c_0 Rep_2158_c_0_2041 2336698 2337726 - 9.A.11.1.1
TC Rep_2158_c_0 Rep_2158_c_0_2042 2337962 2339314 + 2.A.49.9.2
pfam Rep_2158_c_0 Rep_2158_c_0_2043 2339404 2341167 - VanW
pfam Rep_2158_c_0 Rep_2158_c_0_2044 2341230 2341616 - DUF3783
TC Rep_2158_c_0 Rep_2158_c_0_2045 2341736 2342185 - 9.A.11.1.1
TC Rep_2158_c_0 Rep_2158_c_0_2046 2342234 2342650 - 9.A.11.1.1
TC Rep_2158_c_0 Rep_2158_c_0_2047 2342640 2343263 - 9.A.11.1.1
Gene ID: Rep_2158_c_0_2039
Type: CAZyme
Location: 2333470 - 2336241 (+)
Gene ID: Rep_2158_c_0_2040
Type: pfam
Location: 2336340 - 2336696 (-)
Gene ID: Rep_2158_c_0_2041
Type: TC
Location: 2336698 - 2337726 (-)
Gene ID: Rep_2158_c_0_2042
Type: TC
Location: 2337962 - 2339314 (+)
Gene ID: Rep_2158_c_0_2043
Type: pfam
Location: 2339404 - 2341167 (-)
Gene ID: Rep_2158_c_0_2044
Type: pfam
Location: 2341230 - 2341616 (-)
Gene ID: Rep_2158_c_0_2045
Type: TC
Location: 2341736 - 2342185 (-)
Gene ID: Rep_2158_c_0_2046
Type: TC
Location: 2342234 - 2342650 (-)
Gene ID: Rep_2158_c_0_2047
Type: TC
Location: 2342640 - 2343263 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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