Cluster: Rep_2158_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2158
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2158_c_0 | Rep_2158_c_0_1903 | 2171180 | 2172739 | + | 4.C.1.1.4 |
| STP | Rep_2158_c_0 | Rep_2158_c_0_1904 | 2172834 | 2173412 | + | TetR_N |
| CAZyme | Rep_2158_c_0 | Rep_2158_c_0_1905 | 2173661 | 2175130 | - | GH51_1 |
Gene ID: Rep_2158_c_0_1903
Type: TC
Location: 2171180 - 2172739 (+)
Type: TC
Location: 2171180 - 2172739 (+)
Gene ID: Rep_2158_c_0_1904
Type: STP
Location: 2172834 - 2173412 (+)
Type: STP
Location: 2172834 - 2173412 (+)
Gene ID: Rep_2158_c_0_1905
Type: CAZyme
Location: 2173661 - 2175130 (-)
Type: CAZyme
Location: 2173661 - 2175130 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus eutactus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2158_c_0_1905 | vegetarian > omnivore | 1.09396 | 0.01611 |