Cluster: Rep_2158_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2158
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2158_c_0 | Rep_2158_c_0_1073 | 1204563 | 1206062 | + | GH13_5 |
| TF | Rep_2158_c_0 | Rep_2158_c_0_1074 | 1206129 | 1206452 | + | Trp_repressor |
| TF | Rep_2158_c_0 | Rep_2158_c_0_1075 | 1206532 | 1207254 | - | 0042546 |
| TC | Rep_2158_c_0 | Rep_2158_c_0_1076 | 1207487 | 1208770 | - | 9.A.40.2.4 |
| NULL(UNKNOWN) | Rep_2158_c_0 | Rep_2158_c_0_1077 | 1208972 | 1209157 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2158_c_0 | Rep_2158_c_0_1078 | 1209331 | 1210956 | + | 3.A.1.121.4 |
Gene ID: Rep_2158_c_0_1073
Type: CAZyme
Location: 1204563 - 1206062 (+)
Type: CAZyme
Location: 1204563 - 1206062 (+)
Gene ID: Rep_2158_c_0_1074
Type: TF
Location: 1206129 - 1206452 (+)
Type: TF
Location: 1206129 - 1206452 (+)
Gene ID: Rep_2158_c_0_1075
Type: TF
Location: 1206532 - 1207254 (-)
Type: TF
Location: 1206532 - 1207254 (-)
Gene ID: Rep_2158_c_0_1076
Type: TC
Location: 1207487 - 1208770 (-)
Type: TC
Location: 1207487 - 1208770 (-)
Gene ID: Rep_2158_c_0_1077
Type:
Location: 1208972 - 1209157 (+)
Type:
Location: 1208972 - 1209157 (+)
Gene ID: Rep_2158_c_0_1078
Type: TC
Location: 1209331 - 1210956 (+)
Type: TC
Location: 1209331 - 1210956 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus eutactus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.