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Cluster: Rep_2158_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2158_c_0 Rep_2158_c_0_128 111812 113557 - 2.A.21.9.2
pfam Rep_2158_c_0 Rep_2158_c_0_129 113744 116983 - GtrA_DPMS_TM | YfhO
CAZyme Rep_2158_c_0 Rep_2158_c_0_130 117174 119444 - CBM4 | GH9
pfam Rep_2158_c_0 Rep_2158_c_0_131 119444 120223 - His_biosynth
TC Rep_2158_c_0 Rep_2158_c_0_132 120415 121824 + 3.A.24.3.1
TC Rep_2158_c_0 Rep_2158_c_0_133 121898 122641 + 9.B.28.1.3
STP Rep_2158_c_0 Rep_2158_c_0_134 122638 123348 - Pribosyltran
TC Rep_2158_c_0 Rep_2158_c_0_135 123395 125788 - 3.A.7.16.1
TC Rep_2158_c_0 Rep_2158_c_0_136 125869 126861 - 9.B.157.1.1
Gene ID: Rep_2158_c_0_128
Type: TC
Location: 111812 - 113557 (-)
Gene ID: Rep_2158_c_0_129
Type: pfam
Location: 113744 - 116983 (-)
Gene ID: Rep_2158_c_0_130
Type: CAZyme
Location: 117174 - 119444 (-)
Gene ID: Rep_2158_c_0_131
Type: pfam
Location: 119444 - 120223 (-)
Gene ID: Rep_2158_c_0_132
Type: TC
Location: 120415 - 121824 (+)
Gene ID: Rep_2158_c_0_133
Type: TC
Location: 121898 - 122641 (+)
Gene ID: Rep_2158_c_0_134
Type: STP
Location: 122638 - 123348 (-)
Gene ID: Rep_2158_c_0_135
Type: TC
Location: 123395 - 125788 (-)
Gene ID: Rep_2158_c_0_136
Type: TC
Location: 125869 - 126861 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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