Cluster: Rep_2158_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2158
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2158_c_0 | Rep_2158_c_0_861 | 990768 | 992891 | - | 9.B.74.1.1 |
| NULL(UNKNOWN) | Rep_2158_c_0 | Rep_2158_c_0_862 | 992888 | 993532 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2158_c_0 | Rep_2158_c_0_863 | 993578 | 995719 | - | 9.B.74.1.1 |
| pfam | Rep_2158_c_0 | Rep_2158_c_0_864 | 995820 | 997166 | - | Aldedh |
| CAZyme | Rep_2158_c_0 | Rep_2158_c_0_865 | 997487 | 999079 | - | GH13_44 |
| TC | Rep_2158_c_0 | Rep_2158_c_0_866 | 999623 | 1001146 | + | 2.A.22.5.3 |
Gene ID: Rep_2158_c_0_861
Type: TC
Location: 990768 - 992891 (-)
Type: TC
Location: 990768 - 992891 (-)
Gene ID: Rep_2158_c_0_862
Type:
Location: 992888 - 993532 (-)
Type:
Location: 992888 - 993532 (-)
Gene ID: Rep_2158_c_0_863
Type: TC
Location: 993578 - 995719 (-)
Type: TC
Location: 993578 - 995719 (-)
Gene ID: Rep_2158_c_0_864
Type: pfam
Location: 995820 - 997166 (-)
Type: pfam
Location: 995820 - 997166 (-)
Gene ID: Rep_2158_c_0_865
Type: CAZyme
Location: 997487 - 999079 (-)
Type: CAZyme
Location: 997487 - 999079 (-)
Gene ID: Rep_2158_c_0_866
Type: TC
Location: 999623 - 1001146 (+)
Type: TC
Location: 999623 - 1001146 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus eutactus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.