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Cluster: Rep_2158_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2158_c_0 Rep_2158_c_0_823 952351 953850 + 3.A.1.2.20
TC Rep_2158_c_0 Rep_2158_c_0_824 953852 954871 + 3.A.1.2.15
CAZyme Rep_2158_c_0 Rep_2158_c_0_825 954957 956435 + GH32
STP Rep_2158_c_0 Rep_2158_c_0_826 956457 957422 + PfkB
TC Rep_2158_c_0 Rep_2158_c_0_827 957731 959347 + 4.C.1.1.4
pfam Rep_2158_c_0 Rep_2158_c_0_828 959433 959660 + PP-binding
TC Rep_2158_c_0 Rep_2158_c_0_829 959730 961319 + 2.A.50.2.1
Gene ID: Rep_2158_c_0_823
Type: TC
Location: 952351 - 953850 (+)
Gene ID: Rep_2158_c_0_824
Type: TC
Location: 953852 - 954871 (+)
Gene ID: Rep_2158_c_0_825
Type: CAZyme
Location: 954957 - 956435 (+)
Gene ID: Rep_2158_c_0_826
Type: STP
Location: 956457 - 957422 (+)
Gene ID: Rep_2158_c_0_827
Type: TC
Location: 957731 - 959347 (+)
Gene ID: Rep_2158_c_0_828
Type: pfam
Location: 959433 - 959660 (+)
Gene ID: Rep_2158_c_0_829
Type: TC
Location: 959730 - 961319 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2158_c_0_823 vegetarian > omnivore 1.16046 0.01611
Rep_2158_c_0_824 vegan > omnivore 1.36436 0.04174
Rep_2158_c_0_824 vegetarian > omnivore 1.53872 0.01611
Rep_2158_c_0_826 vegan > omnivore 1.56339 0.01033
Rep_2158_c_0_826 vegetarian > omnivore 1.45191 0.01611

🧭 Explore Read Mapping of CGC

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