Cluster: Rep_2157_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_388 | 445273 | 446031 | + | GT2 |
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_389 | 446028 | 447059 | + | GT2 |
| TC | Rep_2157_c_0 | Rep_2157_c_0_390 | 447085 | 447873 | + | 3.A.1.103.4 |
| TC | Rep_2157_c_0 | Rep_2157_c_0_391 | 447886 | 448746 | + | 3.A.1.103.5 |
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_392 | 448795 | 450627 | + | GT2 |
Gene ID: Rep_2157_c_0_388
Type: CAZyme
Location: 445273 - 446031 (+)
Type: CAZyme
Location: 445273 - 446031 (+)
Gene ID: Rep_2157_c_0_389
Type: CAZyme
Location: 446028 - 447059 (+)
Type: CAZyme
Location: 446028 - 447059 (+)
Gene ID: Rep_2157_c_0_390
Type: TC
Location: 447085 - 447873 (+)
Type: TC
Location: 447085 - 447873 (+)
Gene ID: Rep_2157_c_0_391
Type: TC
Location: 447886 - 448746 (+)
Type: TC
Location: 447886 - 448746 (+)
Gene ID: Rep_2157_c_0_392
Type: CAZyme
Location: 448795 - 450627 (+)
Type: CAZyme
Location: 448795 - 450627 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2157_c_0_389 | vegetarian > omnivore | 1.11159 | 0.03124 |