Cluster: Rep_2157_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2157_c_0 | Rep_2157_c_0_339 | 381690 | 383126 | + | 3.A.1.1.27 |
| TC | Rep_2157_c_0 | Rep_2157_c_0_340 | 383126 | 383968 | + | 3.A.1.1.27 |
| NULL(UNKNOWN) | Rep_2157_c_0 | Rep_2157_c_0_341 | 384179 | 386020 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2157_c_0 | Rep_2157_c_0_342 | 385993 | 386205 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_343 | 386242 | 387474 | + | GH53 |
Gene ID: Rep_2157_c_0_339
Type: TC
Location: 381690 - 383126 (+)
Type: TC
Location: 381690 - 383126 (+)
Gene ID: Rep_2157_c_0_340
Type: TC
Location: 383126 - 383968 (+)
Type: TC
Location: 383126 - 383968 (+)
Gene ID: Rep_2157_c_0_341
Type:
Location: 384179 - 386020 (+)
Type:
Location: 384179 - 386020 (+)
Gene ID: Rep_2157_c_0_342
Type:
Location: 385993 - 386205 (+)
Type:
Location: 385993 - 386205 (+)
Gene ID: Rep_2157_c_0_343
Type: CAZyme
Location: 386242 - 387474 (+)
Type: CAZyme
Location: 386242 - 387474 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.