Cluster: Rep_2157_CGC40
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2157_c_0 | Rep_2157_c_0_3021 | 3318812 | 3319387 | + | 3.A.1.25.5 |
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_3022 | 3319853 | 3321418 | - | CBM50 |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_3023 | 3321453 | 3321902 | - | PrcB_C |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_3024 | 3322092 | 3323924 | - | tRNA-synt_2 | tRNA_anti-codon | GAD |
| TC | Rep_2157_c_0 | Rep_2157_c_0_3025 | 3323979 | 3324593 | - | 8.A.59.4.1 |
Gene ID: Rep_2157_c_0_3021
Type: TC
Location: 3318812 - 3319387 (+)
Type: TC
Location: 3318812 - 3319387 (+)
Gene ID: Rep_2157_c_0_3022
Type: CAZyme
Location: 3319853 - 3321418 (-)
Type: CAZyme
Location: 3319853 - 3321418 (-)
Gene ID: Rep_2157_c_0_3023
Type: pfam
Location: 3321453 - 3321902 (-)
Type: pfam
Location: 3321453 - 3321902 (-)
Gene ID: Rep_2157_c_0_3024
Type: pfam
Location: 3322092 - 3323924 (-)
Type: pfam
Location: 3322092 - 3323924 (-)
Gene ID: Rep_2157_c_0_3025
Type: TC
Location: 3323979 - 3324593 (-)
Type: TC
Location: 3323979 - 3324593 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.