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Cluster: Rep_2157_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2157_c_0 Rep_2157_c_0_2971 3252144 3253889 - 2.A.21.9.2
pfam Rep_2157_c_0 Rep_2157_c_0_2972 3254121 3257168 - GtrA_DPMS_TM | YfhO
CAZyme Rep_2157_c_0 Rep_2157_c_0_2973 3257254 3259527 - CBM4 | GH9
pfam Rep_2157_c_0 Rep_2157_c_0_2974 3259529 3260305 - His_biosynth
TC Rep_2157_c_0 Rep_2157_c_0_2975 3260497 3261909 + 3.A.24.3.1
TC Rep_2157_c_0 Rep_2157_c_0_2976 3261952 3262611 + 9.B.28.1.3
TC Rep_2157_c_0 Rep_2157_c_0_2977 3262608 3263339 - 3.A.11.1.4
TC Rep_2157_c_0 Rep_2157_c_0_2978 3263336 3265678 - 3.A.7.16.1
TC Rep_2157_c_0 Rep_2157_c_0_2979 3265718 3266710 - 9.B.157.1.1
Gene ID: Rep_2157_c_0_2971
Type: TC
Location: 3252144 - 3253889 (-)
Gene ID: Rep_2157_c_0_2972
Type: pfam
Location: 3254121 - 3257168 (-)
Gene ID: Rep_2157_c_0_2973
Type: CAZyme
Location: 3257254 - 3259527 (-)
Gene ID: Rep_2157_c_0_2974
Type: pfam
Location: 3259529 - 3260305 (-)
Gene ID: Rep_2157_c_0_2975
Type: TC
Location: 3260497 - 3261909 (+)
Gene ID: Rep_2157_c_0_2976
Type: TC
Location: 3261952 - 3262611 (+)
Gene ID: Rep_2157_c_0_2977
Type: TC
Location: 3262608 - 3263339 (-)
Gene ID: Rep_2157_c_0_2978
Type: TC
Location: 3263336 - 3265678 (-)
Gene ID: Rep_2157_c_0_2979
Type: TC
Location: 3265718 - 3266710 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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